Dr Han Ming Gan

STAFF PROFILE

Position

Senior Research Fellow

Faculty

Faculty of Sci Eng & Built Env

Department

School of Life & Env. Sciences

Campus

Geelong Waurn Ponds Campus

Contact

han.gan@deakin.edu.au
+61 3 524 79383, 91365

Publications

Filter by

2018

Climate-driven mitochondrial selection: a test in Australian songbirds

A Lamb, H Gan, C Greening, L Joseph, Y Lee, A Morán-Ordóñez, P Sunnucks, A Pavlova

(2018), Vol. 27, pp. 898-918, Molecular ecology, Chichester, Eng., C1

journal

Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly

M Tan, C Austin, M Hammer, Y Lee, L Croft, H Gan

(2018), Vol. 7, pp. 1-6, Gigascience, Oxford, Eng., C1

journal

High-throughput terrestrial biodiversity assessments: mitochondrial metabarcoding, metagenomics or metatranscriptomics?

J Wilson, G Brandon-Mong, H Gan, K Sing

(2018), pp. 1-8, Mitochondrial DNA Part A: DNA mapping, sequencing, and analysis, Abingdon, Eng., C1

journal

More limbs on the tree: mitogenome characterisation and systematic position of 'living fossil' species Neoglyphea inopinata and Laurentaeglyphea neocaledonica (Decapoda : Glypheidea : Glypheidae)

M Tan, H Gan, G Dally, S Horner, P Rodríguez Moreno, S Rahman, C Austin

(2018), Vol. 32, pp. 448-456, Invertebrate systematics, Clayton, Vic., C1

journal

Order within the chaos: insights into phylogenetic relationships within the Anomura (Crustacea: Decapoda) from mitochondrial sequences and gene order rearrangements

Mun Tan, Han Gan, Yin Lee, Stuart Linton, Frederic Grandjean, Marlise Bartholomei-Santos, Adam Miller, Christopher Austin

(2018), Vol. 127, pp. 320-331, Molecular phylogenetics and evolution, Amsterdam, The Netherlands, C1

journal

Expansion and systematics redefinition of the most threatened freshwater mussel family, the Margaritiferidae

M Lopes-Lima, I Bolotov, V Do, D Aldridge, M Fonseca, H Gan, M Gofarov, A Kondakov, V Prié, R Sousa, S Varandas, I Vikhrev, A Teixeira, R Wu, X Wu, A Zieritz, E Froufe, A Bogan

(2018), Vol. 127, pp. 98-118, Molecular Phylogenetics and Evolution, Amsterdam, The Netherlands, C1

journal

Time-resolved microbial guild responses to tidal cycling in a coastal acid-sulfate system

Y Ling, H Gan, M Bush, R Bush, J Moreau

(2018), Vol. 15, pp. 2-17, Environmental chemistry, Clayton, Vic., C1

journal

Transcriptome-guided identification of carbohydrate active enzymes (CAZy) from the Christmas Island red crab, Gecarcoidea natalis and a vote for the Inclusion of transcriptome-derived crustacean CAZys in comparative studies

Han Gan, Christopher Austin, Stuart Linton

(2018), pp. 1-12, Marine biotechnology, New York, N.Y., C1

journal
2017

Purifying selection and genetic drift shaped Pleistocene evolution of the mitochondrial genome in an endangered Australian freshwater fish

A Pavlova, H Gan, Y Lee, C Austin, D Gilligan, M Lintermans, P Sunnucks

(2017), Vol. 118, pp. 466-476, Heredity, London, Eng., C1-1

journal

Digging deeper: new gene order rearrangements and distinct patterns of codons usage in mitochondrial genomes among shrimps from the Axiidea, Gebiidea and Caridea (Crustacea: Decapoda)

M Tan, H Gan, Y Lee, G Poore, C Austin

(2017), Vol. 5, pp. 1-23, PeerJ, London, Eng., C1

journal

Rapid recovery of nuclear and mitochondrial genes by genome skimming from Northern Hemisphere freshwater crayfish

F Grandjean, M Tan, H Gan, Y Lee, T Kawai, R Distefano, M Blaha, A Roles, C Austin

(2017), Vol. 46, pp. 718-728, Zoologica scripta, London, Eng., C1

journal

Elucidating the diet of the island flying fox (Pteropus hypomelanus) in Peninsular Malaysia through Illumina Next-Generation Sequencing

S Aziz, G Clements, L Peng, A Campos-Arceiz, K McConkey, P Forget, H Gan

(2017), Vol. 5, pp. 1-24, PeerJ, London, Eng., C1-1

journal

Disentangling the taxonomy of the Mahseers (Tor spp.) of Malaysia: an integrated approach using morphology, genetics and historical records

S Walton, H Gan, R Raghavan, A Pinder, A Ahmad

(2017), Vol. 25, pp. 171-183, Reviews in fisheries science and aquaculture, Abingdon, Eng., C1-1

journal

Phylogeography of red muntjacs reveals three distinct mitochondrial lineages

R Martins, J Fickel, M Le, T Van Nguyen, H Nguyen, R Timmins, H Gan, J Rovie-Ryan, D Lenz, D Förster, A Wilting

(2017), Vol. 17, pp. 1-12, BMC evolutionary biology, London, Eng., C1-1

journal

Complete genome sequence of Novosphingobium resinovorum SA1, a versatile xenobiotic-degrading bacterium capable of utilizing sulfanilic acid

B Heged?s, P Kós, B Bálint, G Maróti, H Gan, K Perei, G Rákhely

(2017), Vol. 241, pp. 76-80, Journal of biotechnology, Amsterdam, The Netherlands, C1-1

journal

In-silico taxonomic classification of 373 genomes reveals species misidentification and new genospecies within the genus Pseudomonas

P Tran, M Savka, H Gan

(2017), Vol. 8, pp. 1-7, Frontiers in microbiology, Lausanne, Switzerland, C1

journal

Genomic characterization of eight Ensifer strains isolated from pristine caves and a whole genome phylogeny of Ensifer (Sinorhizobium)

H Kumar, H Gan, M Tan, W Eng, H Barton, A Hudson, M Savka

(2017), Vol. 5, pp. 12-15, Journal of genomics, Sydney, N.S.W., C1-1

journal

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read

C Austin, M Tan, K Harrisson, Y Lee, L Croft, P Sunnucks, A Pavlova, H Gan

(2017), Vol. 6, pp. 1-6, Gigascience, Oxford, Eng., C1

journal

Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity

K Harrisson, S Amish, A Pavlova, S Narum, M Telonis-Scott, M Rourke, J Lyon, Z Tonkin, D Gilligan, B Ingram, M Lintermans, H Gan, C Austin, G Luikart, P Sunnucks

(2017), pp. 1-43, Molecular ecology, Chichester, Eng., C1

journal

More evolution underground: accelerated mitochondrial substitution rate in Australian burrowing freshwater crayfishes (Decapoda: Parastacidae)

H Gan, M Tan, Y Lee, M Schultz, P Horwitz, Q Burnham, C Austin

(2017), Vol. 118, pp. 88-98, Molecular phylogenetics and evolution, Amsterdam, The Netherlands, C1

journal

Nanopore long-read guided complete genome assembly of Hydrogenophaga intermedia, and genomic insights into 4-aminobenzenesulfonate, p-aminobenzoic acid and hydrogen metabolism in the genus Hydrogenophaga

H Gan, Y Lee, C Austin

(2017), Vol. 8, pp. 1-9, Frontiers in microbiology, Lausanne, Switzerland, C1

journal

Changes in rumen protozoal community by condensed tannin fractions of different molecular weights from a Leucaena leucocephala hybrid in vitro

M Saminathan, H Gan, N Abdullah, C Wong, S Ramiah, H Tan, C Sieo, Y Ho

(2017), Vol. 123, pp. 41-53, Journal of applied microbiology, Chichester, Eng., C1-1

journal

Whole genome sequencing of Rhodotorula mucilaginosa isolated from the chewing stick (Distemonanthus benthamianus): insights into Rhodotorula phylogeny, mitogenome dynamics and carotenoid biosynthesis

H Gan, B Thomas, N Cavanaugh, G Morales, A Mayers, M Savka, A Hudson

(2017), Vol. 5, pp. 1-1, PeerJ, San Diego, Calif., C1

journal

In situ stimulation of thiocyanate biodegradation through phosphate amendment in gold mine tailings water

M Watts, H Gan, L Peng, K Lê Cao, J Moreau

(2017), Vol. 51, pp. 13353-13362, Environmental science and technology, Washington, D.C., C1

journal

iDNA at sea: recovery of whale shark (Rhincodon typus) mitochondrial DNA sequences from the whale shark copepod (Pandarus rhincodonicus) confirms global population structure

M Meekan, C Austin, M Tan, N Wei, A Miller, S Pierce, D Rowat, G Stevens, T Davies, A Ponzo, H Gan

(2017), Vol. 4, pp. 1-8, Frontiers in marine science, Lausanne, Switzerland, C1

journal

High-resolution bacterial 16S rRNA gene profile meta-analysis and biofilm status reveal common colorectal cancer consortia

J Drewes, J White, C Dejea, P Fathi, T Iyadorai, J Vadivelu, A Roslani, E Wick, E Mongodin, M Loke, K Thulasi, H Gan, K Goh, H Chong, S Kumar, J Wanyiri, C Sears

(2017), Vol. 3, npj biofilms and microbiomes, London, Eng., C1-1

journal

Characterization of an autotrophic bioreactor microbial consortium degrading thiocyanate

M Watts, L Spurr, H Gan, J Moreau

(2017), Vol. 101, pp. 5889-5901, Applied microbiology and biotechnology, Berlin, Germany, C1-1

journal

Draft genome sequences of six Enterococcus faecalis strains isolated from Malaysian clinical and environmental origins

D Daniel, H Gan, S Lee, G Dykes, S Rahman

(2017), Vol. 5, Genome announcements, Washington, D.C., C1-1

journal
2016

First comprehensive multi-tissue transcriptome of Cherax quadricarinatus (Decapoda: Parastacidae) reveals unexpected diversity of endogenous cellulase

M Tan, H Gan, H Gan, Y Lee, L Croft, M Schultz, A Miller, C Austin

(2016), Vol. 16, pp. 185-200, Organisms diversity and evolution, Berlin, Germany, C1-1

journal

Pleistocene divergence across a mountain range and the influence of selection on mitogenome evolution in threatened Australian freshwater cod species

K Harrisson, A Pavlova, H Gan, Y Lee, C Austin, P Sunnucks

(2016), Vol. 116, pp. 506-515, Heredity, London, Eng., C1-1

journal

Characterisation of 12 microsatellite loci in the Vietnamese commercial clam Lutraria rhynchaena Jonas 1844 (Heterodonta: Bivalvia: Mactridae) through next-generation sequencing

B Thai, M Tan, Y Lee, H Gan, T Tran, C Austin

(2016), Vol. 43, pp. 391-396, Molecular Biology Reports, Berlin, Germany, C1-1

journal

The complete mitogenome of the endangered white-clawed freshwater crayfish Austropotamobius pallipes (Lereboullet, 1858) (Crustacea: Decapoda: Astacidae)

F Grandjean, M Tan, H Gan, H Gan, C Austin

(2016), Vol. 27, pp. 3329-3330, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

Mitochondrial genomes of the jungle crow Corvus macrorhynchos (Passeriformes: Corvidae) from shed feathers and a phylogenetic analysis of genus Corvus using mitochondrial protein-coding genes

U Krzeminska, R Wilson, S Rahman, B Song, S Seneviratne, H Gan, C Austin

(2016), Vol. 27, pp. 2668-2670, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the New Zealand freshwater crayfish Paranephrops planifrons White 1842 (Crustacea: Decapoda: Parastacidae)

Y Lee, H Gan, M Tan, I Lys, R Page, B Dias Wanigasekera, C Austin

(2016), Vol. 27, pp. 3333-3334, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the giant clam Tridacna squamosa (Heterodonta: Bivalvia: Tridacnidae)

H Gan, H Gan, M Tan, S Penny, R Willan, C Austin

(2016), Vol. 27, pp. 3220-3221, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the bluespotted ribbontail ray Taeniura lymma (Forsskål, 1775) (Elasmobranchii: Myliobatiformes: Dasyatidae)

C Austin, M Tan, L Croft, M Meekan, H Gan, H Gan

(2016), Vol. 27, pp. 3205-3207, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Australian freshwater shrimp Paratya australiensis Kemp, 1917 (Crustacea: Decapoda: Atyidae)

H Gan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3157-3158, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the rock pool prawn Palaemon serenus (Heller, 1862) (Crustacea: Decapoda: Palaemonidae)

H Gan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3155-3156, Mitochondrial DNA part A, London, Eng., C1-1

journal

The complete mitogenome of the invasive spiny-cheek crayfish Orconectes limosus (Rafinesque, 1817) (Crustacea: Decapoda: Cambaridae)

H Gan, H Gan, Y Lee, F Grandjean, C Austin

(2016), Vol. 27, pp. 3181-3183, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Norway lobster Nephrops norvegicus (Linnaeus, 1758) (Crustacea: Decapoda: Nephropidae)

H Gan, M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3179-3180, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the minute mudskipper, Periophthalmus minutus Eggert, 1935 (Perciformes: Gobiidae: Oxudercinae)

H Gan, M Tan, Y Lee, M Hammer, C Austin

(2016), Vol. 27, pp. 4187-4188, Mitochondrial DNA part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the hermit crab Clibanarius infraspinatus (Hilgendorf, 1869), (Crustacea; Decapoda; Diogenidae) - a new gene order for the Decapoda

H Gan, H Gan, M Tan, Y Lee, C Austin

(2016), Vol. 27, pp. 4099-4100, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the endangered freshwater crayfish Cherax tenuimanus (Smith 1912) (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, H Gan, H Gan

(2016), Vol. 27, pp. 4176-4177, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the porcelain crab Petrolisthes haswelli Miers, 1884 (Crustacea: Decapoda: Anomura)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3983-3984, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of purple mottled shore crab Cyclograpsus granulosus H. Milne-Edwards, 1853 (Crustacea: Decapoda: Grapsoidea)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3981-3982, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitochondrial genome of the bass yabby Trypaea australiensis Dana 1852, (Crustacea; Decapoda; Callianassidae) - a new gene order for the Decapoda

H Gan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 3985-3986, Mitochondrial DNA part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the river blackfish, Gadopsis marmoratus (Richardson, 1848) (Teleostei: Percichthyidae)

H Gan, M Tan, Y Lee, C Austin

(2016), Vol. 27, pp. 2030-2031, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the soldier crab Mictyris longicarpus (Latreille, 1806) (Crustacea: Decapoda: Mictyridae)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 2121-2122, Mitochondrial DNA Part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the ghost crab Ocypode ceratophthalmus (Pallas, 1772) (Crustacea: Decapoda: Ocypodidae)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 2123-2124, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Morton Bay bug Thenus orientalis (Lund, 1793) (Crustacea: Decapoda: Scyllaridae) from a cooked sample and a new mitogenome order for the Decapoda

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 1277-1278, Mitochondrial DNA part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Australian tadpole shrimp Triops australiensis (Spencer & Hall, 1895) (Crustacea: Branchiopoda: Notostraca)

H Gan, M Tan, Y Lee, C Austin

(2016), Vol. 27, pp. 2028-2029, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the moon crab Ashtoret lunaris (Forskal, 1775), (Crustacea; Decapoda; Matutidae)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 1313-1314, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the swimming crab Thalamita crenata (Rüppell, 1830) (Crustacea; Decapoda; Portunidae)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 1275-1276, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the stone crab Myomenippe fornasinii (Bianconi, 1851) (Crustacea: Decapoda: Menippidae)

M Tan, H Gan, Y Lee, C Austin

(2016), Vol. 27, pp. 1374-1375, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the cow tail ray Pastinachus atrus (Macleay, 1883) (Elasmobranchii; Myliobatiformes; Dasyatidae)

C Austin, M Tan, Y Lee, L Croft, M Meekan, H Gan

(2016), Vol. 27, pp. 1372-1373, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitochondrial genome of the invasive house crow Corvus splendens (Passeriformes: Corvidae)

U Krzeminska, R Wilson, S Rahman, B Song, H Gan, M Tan, C Austin

(2016), Vol. 27, pp. 974-975, Mitochondrial DNA part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Australian spiny crayfish Euastacus yarraensis (McCoy, 1888) (Crustacea: Decapoda: Parastacidae)

H Gan, M Tan, C Austin

(2016), Vol. 27, pp. 929-930, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Murray Cod, Maccullochella peelii (Mitchell, 1838) (Teleostei: Percichthyidae)

C Austin, M Tan, Y Lee, L Croft, H Gan

(2016), Vol. 27, pp. 729-730, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the whale shark parasitic copepod Pandarus rhincodonicus norman, Newbound & Knott (Crustacea; Siphonostomatoida; Pandaridae) - a new gene order for the copepoda

C Austin, M Tan, Y Lee, L Croft, M Meekan, S Pierce, H Gan

(2016), Vol. 27, pp. 694-695, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Australian crayfish Geocharax gracilis Clark 1936 (Crustacea: Decapoda: Parastacidae)

H Gan, M Tan, H Gan, Y Lee, M Schultz, C Austin

(2016), Vol. 27, pp. 826-827, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Macquarie perch, Macquaria australasica Cuvier, 1830 (Teleostei: Percichthyidae)

H Gan, M Tan, C Austin

(2016), Vol. 27, pp. 383-384, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the red claw crayfish Cherax quadricarinatus (Von Martens, 1868) (Crustacea: Decapoda: Parastacidae)

H Gan, M Tan, C Austin

(2016), Vol. 27, pp. 385-386, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Australian land crayfish Engaeus lyelli (Clark 1936) (Crustacea: Decapoda: Parastacidae)

H Gan, M Tan, Y Lee, M Schultz, C Austin

(2016), Vol. 27, pp. 595-596, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of Cherax monticola (Crustacea: Decapoda: Parastacidae), a large highland crayfish from New Guinea

H Gan, M Tan, R Eprilurahman, C Austin

(2016), Vol. 27, pp. 337-338, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the marine bivalve Lutraria rhynchaena Jonas 1844 (Heterodonta: Bivalvia: Mactridae)

H Gan, M Tan, B Thai, C Austin

(2016), Vol. 27, pp. 335-336, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the freshwater crayfish Cherax cainii (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 126-127, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the crayfish Cherax glaber (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 220-221, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

Genetic diversity of Enterococcus faecalis isolated from environmental, animal and clinical sources in Malaysia

D Daniel, S Lee, H Gan, G Dykes, S Rahman

(2016), Vol. 10, pp. 617-623, Journal of infection and public health, Amsterdam, The Netherlands, C1-1

journal

A newly identified population of Gambusia affinis (Baird and Girard, 1853), a non-native invasive species, in Lake Kenyir, Malaysia: implications for management

S Walton, A Ahmad, H Gan, J Bolland

(2016), Vol. 5, pp. 107-114, Bioinvasions records, Helsinki, Finland, C1-1

journal

Field calibration of blowfly-derived DNA against traditional methods for assessing mammal diversity in tropical forests

P-S Lee, H Gan, G Clements, J-J Wilson

(2016), Vol. 59, pp. 1008-1022, Genome, Ottawa, Ont., C1-1

journal

Genome sequencing-assisted identification and the first functional validation of N-acyl-homoserine-lactone synthases from the Sphingomonadaceae family

H Gan, L Dailey, N Halliday, P Williams, A Hudson, M Savka

(2016), Vol. 2016, pp. 1-20, PeerJ, London, Eng., C1-1

journal

Impact of dengue virus (DENV) co-infection on clinical manifestations, disease severity and laboratory parameters

A Dhanoa, S Hassan, C Ngim, C Lau, T Chan, N Adnan, W Eng, H Gan, G Rajasekaram

(2016), Vol. 16, pp. 1-14, BMC infectious diseases, London, Eng., C1-1

journal

Modulatory effects of condensed tannin fractions of different molecular weights from a Leucaena leucocephala hybrid on the bovine rumen bacterial community in vitro

M Saminathan, C Sieo, H Gan, S Ravi, K Venkatachalam, N Abdullah, C Wong, Y Ho

(2016), Vol. 96, pp. 4565-4574, Journal of the science of food and agriculture, Chichester, Eng., C1-1

journal

Identification and partial characterization of a novel UDP-N-acetylenolpyruvoylglucosamine reductase/UDP-N-acetylmuramate: L-alanine ligase fusion enzyme from Verrucomicrobium spinosum DSM 4136T

K Naqvi, D Patin, M Wheatley, M Savka, R Dobson, H Gan, H Barreteau, D Blanot, D Mengin-Lecreulx, A Hudson

(2016), Vol. 7, pp. 1-13, Frontiers in microbiology, Lausanne, Switzerland, C1-1

journal

Global MLST of Salmonella Typhi revisited in post-genomic era: genetic conservation, population structure, and comparative genomics of rare sequence types

K Yap, W Ho, H Gan, L Chai, K Thong

(2016), Vol. 7, pp. 1-12, Frontiers in microbiology, Lausanne, Switzerland, C1-1

journal

Effects of condensed tannin fractions of different molecular weights on population and diversity of bovine rumen methanogenic archaea in vitro, as determined by high-throughput sequencing

M Saminathan, C Sieo, H Gan, N Abdullah, C Wong, Y Ho

(2016), Vol. 216, pp. 146-160, Animal feed science and technology, Amsterdam, The Netherlands, C1-1

journal

Helicobacter pylori eradication causes perturbation of the human gut microbiome in young adults

T Yap, H-M Gan, Y-P Lee, A Leow, A Azmi, F Francois, G Perez-Perez, M-F Loke, K-L Goh, J Vadivelu

(2016), Vol. 11, pp. 1-20, PLoS one, San Francisco, Calif., C1-1

journal
2015

Whole genome sequencing of the Asian Arowana (Scleropages formosus) provides insights into the evolution of ray-finned fishes

C Austin, M Tan, L Croft, M Hammer, H Gan

(2015), Vol. 7, pp. 2885-2895, Genome biology and evolution, Oxford, Eng., C1-1

journal

MitoPhAST, a new automated mitogenomic phylogeny tool in the post-genomic era with a case study of 89 decapod mitogenomes including eight new freshwater crayfish mitogenomes

M Tan, H Gan, M Schultz, C Austin

(2015), Vol. 85, pp. 180-188, Molecular phylogenetics and evolution, Amsterdam, The Netherlands, C1-1

journal

DNA metabarcoding of insects and allies: an evaluation of primers and pipelines

G-J Brandon-Mong, H-M Gan, K-W Sing, P-S Lee, P-E Lim, J-J Wilson

(2015), Vol. 105, pp. 717-727, Bulletin of entomological research, Cambridge, Eng., C1-1

journal

Crustal fluid and ash alteration impacts on the biosphere of Shikoku Basin sediments, Nankai Trough, Japan

M Torres, T Cox, W-L Hong, J McManus, J Sample, C Destrigneville, H Gan, H Gan, J Moreau

(2015), Vol. 13, pp. 562-580, Geobiology, Chichester, Eng., C1-1

journal

Deciphering chicken gut microbial dynamics based on high-throughput 16S rRNA metagenomics analyses

M Mohd Shaufi, C Sieo, C Chong, H Gan, Y Ho

(2015), Vol. 7, pp. 1-12, Gut pathogens, London, Eng., C1-1

journal

Whole genome sequencing and analysis reveal insights into the genetic structure, diversity and evolutionary relatedness of luxI and luxR homologs in bacteria belonging to the Sphingomonadaceae family

H Gan, H Gan, N Ahmad, N Aziz, A Hudson, M Savka

(2015), Vol. 4, pp. 1-14, Frontiers in cellular and infection microbiology, Lausanne, Switzerland, C1-1

journal
2014

Draft genome sequence of Clostridium perfringens strain JJC, a highly efficient hydrogen producer isolated from landfill leachate sludge

Y Wong, J Juan, H Gan, C Austin

(2014), Vol. 2, pp. 1-2, Genome announcements, Washington, D.C., C1-1

journal

Draft genome sequence of Clostridium bifermentans strain WYM, a promising biohydrogen producer isolated from landfill leachate sludge

Y Wong, J Juan, H Gan, C Austin

(2014), Vol. 2, Genome announcements, Washington, D.C., C1-1

journal

Draft genome sequence of Clostridium sp. Strain Ade.TY, a new biohydrogen- and biochemical-producing bacterium isolated from landfill leachate sludge

Y Wong, J Juan, A Ting, T Wu, H Gan, C Austin

(2014), Vol. 2, pp. 1-2, Genome announcements, Washington, D.C., C1-1

journal

Integrated shotgun sequencing and bioinformatics pipeline allows ultra-fast mitogenome recovery and confirms substantial gene rearrangements in Australian freshwater crayfishes

H Gan, M Schultz, C Austin

(2014), Vol. 14, pp. 1-8, Genome biology and evolution, London, Eng., C1-1

journal

Analysis of Anoxybacillus genomes from the aspects of lifestyle adaptations, prophage diversity, and carbohydrate metabolism

K Goh, H Gan, K-G Chan, G Chan, S Shahar, C Chong, U Kahar, K Chai

(2014), Vol. 9, pp. 1-15, PLoS one, San Francisco, Calif., C1-1

journal

Comparative genomics of closely related Salmonella enterica serovar Typhi strains reveals genome dynamics and the acquisition of novel pathogenic elements

K-P Yap, H Gan, C Teh, L Chai, K Thong

(2014), Vol. 15, pp. 1-20, BMC genomics, London, Eng., C1-1

journal

Microbial succession and the functional potential during the fermentation of Chinese soy sauce brine

J Sulaiman, H Gan, W-F Yin, K-G Chan

(2014), Vol. 5, pp. 1-9, Frontiers in microbiology, Lausanne, Switzerland, C1-1

journal

L,L-diaminopimelate aminotransferase (DapL): a putative target for the development of narrow-spectrum antibacterial compounds

A Triassi, M Wheatley, M Savka, H Gan, R Dobson, A Hudson

(2014), Vol. 5, pp. 1-10, Frontiers in microbiology, Lausanne, Switzerland, C1-1

journal
2013

Comparative genomic analysis of six bacteria belonging to the genus Novosphingobium: insights into marine adaptation, cell-cell signaling and bioremediation

H Gan, A Hudson, A Rahman, K Chan, M Savka

(2013), Vol. 14, pp. 1-14, BMC genomics, London, Eng., C1-1

journal

The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80

H Gan, C Sieo, S Tang, A Omar, Y Ho

(2013), Vol. 10, pp. 1-8, Virology journal, London, Eng., C1-1

journal
2012

Cloning and functional analysis of the genes coding for 4-aminobenzenesulfonate 3,4-dioxygenase from Hydrogenophaga sp. PBC

H Gan, S Shahir, A Yahya

(2012), Vol. 158, pp. 1933-1941, Microbiology, Reading, Eng., C1-1

journal
2011

Identification of genes involved in the 4-aminobenzenesulfonate degradation pathway of Hydrogenophaga sp. PBC via transposon mutagenesis

H Gan, Z Ibrahim, S Shahir, A Yahya

(2011), Vol. 318, pp. 108-114, Fems microbiology letters, Oxford, Eng., C1-1

journal

Biodegradation of 4-aminobenzenesulfonate by Ralstonia sp. PBA and Hydrogenophaga sp. PBC isolated from textile wastewater treatment plant

H Gan, S Shahir, Z Ibrahim, A Yahya

(2011), Vol. 82, pp. 507-513, Chemosphere, Amsterdam, The Netherlands, C1-1

journal
2009

Quorum-sensing signal production by Agrobacterium vitis strains and their tumor-inducing and tartrate-catabolic plasmids.

N Lowe, H Gan, V Chakravartty, R Scott, E Szegedi, T Burr, M Savka

(2009), Vol. 296, pp. 102-109, Fems Microbiology Letters, England, C1-1

journal

Identification of an rsh gene from a Novosphingobium sp. necessary for quorum-sensing signal accumulation

H Gan, L Buckley, E Szegedi, A Hudson, M Savka

(2009), Vol. 191, pp. 2551-2560, Journal of bacteriology, United States, C1-1

journal

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