Prof Soren Alexandersen

STAFF PROFILE

Position

Affiliate Professor

Faculty

Faculty of Health

Department

School of Medicine

Campus

HERB

Contact

Publications

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2023

Novel Human Parechovirus 3 Diversity, Recombination, and Clinical Impact Across 7 Years: An Australian Story

S Bialasiewicz, M May, S Tozer, R Day, A Bernard, J Zaugg, K Gartrell, S Alexandersen, A Chamings, C Wang, J Clark, K Grimwood, C Heney, L Schlapbach, R Ware, D Speers, R Andrews, S Lambert

(2023), Vol. 227, pp. 278-287, The Journal of infectious diseases, United States, C1

journal article

Comparative subgenomic mRNA profiles of SARS-CoV-2 Alpha, Delta and Omicron BA.1, BA.2 and BA.5 sub-lineages using Danish COVID-19 genomic surveillance data

Man-Hung Tang, Kim Ng, Sofie Edslev, Kirsten Ellegaard, Marc Stegger, Soren Alexandersen

(2023), Vol. 93, pp. 1-14, eBioMedicine, Amsterdam, The Netherlands, C1-1

journal article
2022

Neonatal parechovirus infection: Possibility of in-utero transmission

A Hilbig, K Liew, C Foster, D Fuller, A Chamings, S Alexandersen

(2022), Vol. 58, pp. 1088-1090, Journal of Paediatrics and Child Health, Chichester, Eng., C1

journal article

Severe Human Case of Zoonotic Infection with Swine-Origin Influenza A Virus, Denmark, 2021

K Andersen, L Vestergaard, J Nissen, S George, P Ryt-Hansen, C Hjulsager, J Krog, M Skov, S Alexandersen, L Larsen, R Trebbien

(2022), Vol. 28, pp. 2561-2564, Emerging Infectious Diseases, United States, C1-1

journal article
2021

Exploring the cause of diarrhoea and poor growth in 8-11-week-old pigs from an australian pig herd using metagenomic sequencing

T Bhatta, A Chamings, S Alexandersen

(2021), Vol. 13, pp. 1-21, Viruses, Basel, Switzerland, C1

journal article

Diverse Bacterial Resistance Genes Detected in Fecal Samples From Clinically Healthy Women and Infants in Australia-A Descriptive Pilot Study

V Guernier-Cambert, A Chamings, F Collier, S Alexandersen

(2021), Vol. 12, Frontiers in Microbiology, C1

journal article

Ability to detect antibodies to beak and feather disease virus in blood on filter paper decreases with duration of storage

B Blanch-Lázaro, R Ribot, M Berg, S Alexandersen, A Bennett

(2021), Vol. 9, pp. 1-15, PeerJ, Corte Madera Calif., C1

journal article
2020

Detection of a reassortant H9N2 avian influenza virus with intercontinental gene segments in a resident Australian chestnut teal

T Bhatta, A Chamings, J Vibin, M Klaassen, S Alexandersen

(2020), Vol. 12, Viruses, Switzerland, C1

journal article

Epidemic and inter-epidemic burden of pediatric human parechovirus infection in New South Wales, Australia, 2017-2018

Ameneh Khatami, Rebecca Burrell, Brendan McMullan, William Rawlinson, Rodney Givney, Jen Kok, Soren Alexandersen, Cheryl Jones, Kristine Macartney, Philip Britton

(2020), Vol. 39, pp. 507-511, The pediatric infectious disease journal, Philadelphia, Pa., C1

journal article

Metagenomic characterisation of avian parvoviruses and picornaviruses from Australian wild ducks

J Vibin, A Chamings, M Klaassen, T Bhatta, S Alexandersen

(2020), Vol. 10, Scientific Reports, England, C1

journal article

Infection dynamics of Swine Influenza virus in a Danish pig herd reveals recurrent infections with different variants of the H1N2 Swine Influenza A virus subtype

Tarka Bhatta, Pia Ryt-Hansen, Jens Nielsen, Lars Larsen, Inge Larsen, Anthony Chamings, Nicole Goecke, Soren Alexandersen

(2020), Vol. 12, Viruses, Basel, Switzerland, C1

journal article

SARS-CoV-2 genomic and subgenomic RNAs in diagnostic samples are not an indicator of active replication

Soren Alexandersen, Anthony Chamings, Tarka Bhatta

(2020), Vol. 11, pp. 1-13, Nature Communications, London, Eng., C1

journal article

Metagenomic characterisation of additional and novel avian viruses from Australian wild ducks

J Vibin, A Chamings, M Klaassen, S Alexandersen

(2020), Vol. 10, Scientific Reports, England, C1

journal article
2019

Detection and characterisation of canine astrovirus, canine parvovirus and canine papillomavirus in puppies using next generation sequencing

Tarka Bhatta, Anthony Chamings, Jessy Vibin, Soren Alexandersen

(2019), Vol. 9, Scientific reports, London, Eng., C1

journal article

Evolutionary analysis of human parechovirus type 3 and clinical outcomes of infection during the 2017-18 Australian epidemic

A Chamings, J Druce, L Caly, Y Yoga, P Britton, K Macartney, S Alexandersen

(2019), Vol. 9, Scientific reports, London, Eng., C1

journal article

An emerging human parechovirus type 5 causing sepsis-like illness in infants in Australia

A Chamings, K Liew, E Reid, E Athan,, A Raditsis, P Vuillermin, Y Yoga, L Caly, J Druce, S Alexandersen

(2019), Vol. 11, Viruses, Switzerland, C1

journal article
2018

Detection and characterisation of coronaviruses in migratory and non-migratory Australian wild birds

A Chamings, T Nelson, J Vibin, M Wille, M Klaassen, S Alexandersen

(2018), Vol. 8, Scientific Reports, England, C1

journal article

Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds

J Vibin, A Chamings, F Collier, M Klaassen, T Nelson, S Alexandersen

(2018), Vol. 8, Scientific Reports, England, C1

journal article

The protective capacity of high payload FMDV A22 IRQ vaccine in sheep against direct-contact challenge with a heterologous, contemporary FMDV A strain from South East Asia

Jacquelyn Horsington, Charles Nfon, Hilary Bittner, Peter Durr, Nagendrakumar Singanallur, Soren Alexandersen, Wilna Vosloo

(2018), Vol. 13, pp. 1-15, PLoS one, San Francisco, Calif., C1

journal article
2017

Foot-and-mouth disease in red deer - experimental infection and test methods performance

R Kittelberger, C Nfon, K Swekla, Z Zhang, K Hole, H Bittner, T Salo, M Goolia, C Embury-Hyatt, R Bueno, M Hannah, R Swainsbury, C O'Sullivan, R Spence, R Clough, A Mcfadden, T Rawdon, S Alexandersen

(2017), Vol. 64, pp. 213-225, Transboundary and emerging diseases, London, Eng., C1-1

journal article

An outbreak of severe infections among Australian infants caused by a novel recombinant strain of human parechovirus type 3

T Nelson, P Vuillermin, J Hodge, J Druce, D Williams, R Jasrotia, S Alexandersen

(2017), Vol. 7, Scientific Reports, England, C1

journal article

Evolutionary and network analysis of virus sequences from infants infected with an Australian recombinant strain of human parechovirus type 3

S Alexandersen, T Nelson, J Hodge, J Druce

(2017), Vol. 7, pp. 1-12, Scientific reports, London, Eng., C1

journal article
2016

Epidemiological and evolutionary inference of the transmission network of the 2014 highly pathogenic Avian Influenza H5N2 outbreak in British Columbia, Canada

W Xu, Y Berhane, C Dubé, B Liang, J Pasick, G VanDomselaar, S Alexandersen

(2016), Vol. 6, pp. 1-15, Scientific reports, London, Eng., C1

journal article
2015

Reassortant highly pathogenic influenza a H5N2 virus containing gene segments related to eurasian H5N8 in British Columbia, Canada, 2014

J Pasick, Y Berhane, T Joseph, V Bowes, T Hisanaga, K Handel, S Alexandersen

(2015), Vol. 5, Scientific Reports, England, C1-1

journal article

Early protection in sheep against intratypic heterologous challenge with serotype O foot-and-mouth disease virus using high-potency, emergency vaccine

J Horsington, Z Zhang, H Bittner, K Hole, N Singanallur, S Alexandersen, W Vosloo

(2015), Vol. 33, pp. 422-429, Vaccine, Amsterdam, The Netherlands, C1-1

journal article
2014

Investigation into the role of potentially contaminated feed as a source of the first-detected outbreaks of porcine epidemic diarrhea in Canada

J Pasick, Y Berhane, D Ojkic, G Maxie, C Embury-Hyatt, K Swekla, K Handel, J Fairles, S Alexandersen

(2014), Vol. 61, pp. 397-410, Transboundary and emerging diseases, London, Eng., C1-1

journal article

Middle East respiratory syndrome coronavirus antibody reactors among camels in Dubai, United Arab Emirates, in 2005

S Alexandersen, G Kobinger, G Soule, U Wernery

(2014), Vol. 61, pp. 105-108, Transboundary and emerging diseases, London, Eng., C1-1

journal article
2012

Application of the Ceditest® FMDV type O and FMDV-NS enzyme-linked immunosorbent assays for detection of antibodies against foot-and-mouth disease virus in selected livestock and wildlife species in Uganda

C Ayebazibwe, F Mwiine, S Balinda, K Tjørnehøj, S Alexandersen

(2012), Vol. 24, pp. 270-276, Journal of veterinary diagnostic investigation, London, Eng., C1-1

journal article

Experimental foot-and-mouth disease virus infection in white tailed deer

M Moniwa, C Embury-Hyatt, Z Zhang, K Hole, A Clavijo, J Copps, S Alexandersen

(2012), Vol. 147, pp. 330-342, Journal of comparative pathology, Amsterdam, The Netherlands, C1-1

journal article
2011

Characterization of H1N1 swine influenza viruses circulating in Canadian pigs in 2009

C Nfon, Y Berhane, T Hisanaga, S Zhang, K Handel, H Kehler, O Labrecque, N Lewis, A Vincent, J Copps, S Alexandersen, J Pasick

(2011), Vol. 85, pp. 8667-8679, Journal of virology, Washington D. C., C1-1

journal article
2010

Serotype specificity of antibodies against foot-and-mouth disease virus in cattle in selected districts in Uganda

F Mwiine, C Ayebazibwe, W Olaho-Mukani, S Alexandersen, S Balinda, C Masembe, A Okurut, L Christensen, K Sørensen, K Tjørnehøj

(2010), Vol. 57, pp. 365-374, Transboundary and emerging diseases, Berlin, Germany, C1-1

journal article

Genetic and pathobiologic characterization of pandemic H1N1 2009 influenza viruses from a naturally infected swine herd

H Weingartl, Y Berhane, T Hisanaga, J Neufeld, H Kehler, C Emburry-Hyatt, K Hooper-McGreevy, S Kasloff, B Dalman, J Bystrom, S Alexandersen, Y Li, J Pasick

(2010), Vol. 84, pp. 2245-2256, Journal of virology, Washington, D.C., C1-1

journal article

Patterns, risk factors and characteristics of reported and perceived foot-and-mouth disease (FMD) in Uganda

C Ayebazibwe, K Tjørnehøj, F Mwiine, V Muwanika, A Okurut, H Siegismund, S Alexandersen

(2010), Vol. 42, pp. 1547-1559, Tropical animal health and production, Dordrecht, The Netherlands, C1-1

journal article

Effective animal health disease surveillance using a network-enabled approach

H Kloeze, S Mukhi, P Kitching, V Lees, S Alexandersen

(2010), Vol. 57, pp. 414-419, Transboundary and emerging diseases, Berlin, Germany, C1-1

journal article

Molecular cloning and phylogenetic analysis of integrins αvβ1 and αvβ6 of one-humped camel (Camelus dromedarius)

J Du, M Larska, H Chang, S Alexandersen, X Cai

(2010), Vol. 135, pp. 164-171, Veterinary immunology and immunopathology, Amsterdam, The Netherlands, C1-1

journal article

Foot-and-mouth disease viral loads in pigs in the early, acute stage of disease

C Murphy, J Bashiruddin, M Quan, Z Zhang, S Alexandersen

(2010), Vol. 166, pp. 10-14, Veterinary record, London, Eng., C1-1

journal article

Antibodies against foot-and-mouth disease (FMD) virus in African buffalos (Syncerus caffer) in selected national parks in Uganda (2001-2003)

C Ayebazibwe, F Mwiine, S Balinda, K Tjørnehøj, C Masembe, V Muwanika, A Okurut, H Siegismund, S Alexandersen

(2010), Vol. 57, pp. 286-292, Transboundary and emerging diseases, Berlin, Germany, C1-1

journal article

Options for decentralized testing of suspected secondary outbreaks of foot-and-mouth disease

D Sammin, E Ryan, N Ferris, D King, S Zientara, B Haas, H Yadin, S Alexandersen, K Sumption, D Paton

(2010), Vol. 57, pp. 237-243, Transboundary and emerging diseases, Berlin, Germany, C1-1

journal article

Molecular characterization of pandemic H1N1 influenza viruses isolated from turkeys and pathogenicity of a human pH1N1 isolate in turkeys

Y Berhane, D Ojkic, J Neufeld, M Leith, T Hisanaga, H Kehler, A Ferencz, H Wojcinski, C Cottam-Birt, M Suderman, K Handel, S Alexandersen, J Pasick

(2010), Vol. 54, pp. 1275-1285, Avian diseases, Jacksonville, Fla., C1-1

journal article

The role of African buffalos (syncerus caffer) in the maintenance of foot-and-mouth disease in Uganda

C Ayebazibwe, F Mwiine, K Tjørnehøj, S Balinda, V Muwanika, A Ademun Okurut, G Belsham, P Normann, H Siegismund, S Alexandersen

(2010), Vol. 6, pp. 1-13, BMC veterinary research, London, Eng., C1-1

journal article
2009

An investigation into human pandemic influenza virus (H1N1) 2009 on an Alberta swine farm

K Howden, E Brockhoff, F Caya, L McLeod, M Lavoie, J Ing, J Bystrom, S Alexandersen, J Pasick, Y Berhane, M Morrison, J Keenliside, S Laurendeau, E Rohonczy

(2009), Vol. 50, pp. 1153-1161, Canadian veterinary journal, Ottawa, Ont., C1-1

journal article

Effect of the initial dose of foot-and-mouth disease virus on the early viral dynamics within pigs

R Howey, M Quan, N Savill, L Matthews, S Alexandersen, M Woolhouse

(2009), Vol. 6, pp. 835-847, Journal of the Royal Society. Interface, London, Eng., C1-1

journal article

Prevalence estimates of antibodies towards foot-and-mouth disease virus in small ruminants in Uganda

S Balinda, K Tjørnehøj, V Muwanika, A Sangula, F Mwiine, C Ayebazibwe, C Masembe, H Siegismund, S Alexandersen

(2009), Vol. 56, pp. 362-371, Transboundary and emerging diseases, Berlin, Germany, C1-1

journal article

Differences in the susceptibility of dromedary and Bactrian camels to foot-and-mouth disease virus

M Larska, U Wernery, J Kinne, R Schuster, G Alexandersen, S Alexandersen

(2009), Vol. 137, pp. 549-554, Epidemiology and infection, Cambridge, Eng., C1-1

journal article

Influence of exposure intensity on the efficiency and speed of transmission of foot-and-mouth disease

M Quan, C Murphy, Z Zhang, S Durand, I Esteves, C Doel, S Alexandersen

(2009), Vol. 140, pp. 225-237, Journal of comparative pathology, London, Eng., C1-1

journal article
2008

Foot-and-mouth disease virus infection in young lambs: pathogenesis and tissue tropism

E Ryan, J Horsington, S Durand, H Brooks, S Alexandersen, J Brownlie, Z Zhang

(2008), Vol. 127, pp. 258-274, Veterinary Microbiology, Amsterdam, The Netherlands, C1-1

journal article

Dromedaries (Camelus dromedarius) are of low susceptibility to inoculation with foot-and-mouth disease virus serotype O

S Alexandersen, U Wernery, P Nagy, T Frederiksen, P Normann

(2008), Vol. 139, pp. 187-193, Journal of Comparative Pathology, London, Eng., C1-1

journal article

Epithelial distribution and replication of foot-and-mouth disease virus RNA in infected pigs

S Durand, C Murphy, Z Zhang, S Alexandersen

(2008), Vol. 139, pp. 86-96, Journal of Comparative Pathology, London, Eng, C1-1

journal article

Epidemiology of foot-and-mouth disease in Landhi Dairy Colony, Pakistan, the world largest buffalo colony

J Klein, M Hussain, M Ahmad, M Afzal, S Alexandersen

(2008), Vol. 5, pp. 1-16, Virology journal, London, United Kingdom, C1-1

journal article

Temporal assessment of seroconversion in response to inactivated foot-and-mouth disease vaccine in Arabian oryx (Oryx leucoryx)

C Kilgallon, T Bailey, D O'Donovan, U Wernery, S Alexandersen

(2008), Vol. 163, pp. 717-720, Veterinary Record, England, C1-1

journal article
2006

Novel reverse transcription loop-mediated isothermal amplification for rapid detection of foot-and-mouth disease virus

J Dukes, D King, S Alexandersen

(2006), Vol. 151, pp. 1093-1106, Archives of virology, Berlin, Germany, C1-1

journal article

Cytokine and toll-like receptor mRNAs in the nasal-associated lymphoid tissues of cattle during foot-and-mouth disease virus infection

Z Zhang, J Bashiruddin, C Doel, J Horsington, S Durand, S Alexandersen

(2006), Vol. 134, pp. 56-62, Journal of comparative pathology, Amsterdam, The Netherlands, C1-1

journal article
2005

Use of confocal immunofluorescence microscopy to localize viral nonstructural proteins and potential sites of replication in pigs experimentally infected with foot-and-mouth disease virus

P Monaghan, J Simpson, C Murphy, S Durand, M Quan, S Alexandersen

(2005), Vol. 79, pp. 6410-6418, Journal of virology, Washington, D.C., C1-1

journal article

Re-assessing the likelihood of airborne spread of foot-and-mouth disease at the start of the 1967-1968 UK foot-and-mouth disease epidemic

J Gloster, A Freshwater, R Sellers, S Alexandersen

(2005), Vol. 133, pp. 767-783, Epidemiology & infection, Cambridge, Eng., C1-1

journal article

The ∝vß6 integrin receptor for Foot-and-mouth disease virus is expressed constitutively on the epithelial cells targeted in cattle

P Monaghan, S Gold, J Simpson, Z Zhang, P Weinreb, S Violette, S Alexandersen, T Jackson

(2005), Vol. 86, pp. 2769-2780, Journal of general virology, London, Eng., C1-1

journal article

Importance of arginine 20 of the swine vesicular disease virus 2A protease for activity and virulence

T Inoue, S Alexandersen, A Clark, C Murphy, M Quan, S Reid, Y Sakoda, H Johns, G Belsham

(2005), Vol. 79, pp. 428-440, Journal of virology, Washington, D.C., C1-1

journal article
2004

Use of automated real-time reverse transcription-polymerase chain reaction (RT-PCR) to monitor experimental swine vesicular disease virus infection in pigs

S Reid, D Paton, G Wilsden, G Hutchings, D King, N Ferris, S Alexandersen

(2004), Vol. 131, pp. 308-317, Journal of comparative pathology, Amsterdam, The Netherlands, C1-1

journal article

Determinants of early foot-and-mouth disease virus dynamics in pigs

M Quan, C Murphy, Z Zhang, S Alexandersen

(2004), Vol. 131, pp. 294-307, Journal of comparative pathology, Amsterdam, The Netherlands, C1-1

journal article

Quantitative analysis of foot-and-mouth disease virus RNA loads in bovine tissues: implications for the site of viral persistence

Z Zhang, S Alexandersen

(2004), Vol. 85, pp. 2567-2575, Journal of general virology, London, Eng., C1-1

journal article

Extent of reduction of foot-and-mouth disease virus RNA load in oesophageal-pharyngeal fluid after peak levels may be a critical determinant of virus persistence in infected cattle

Z Zhang, C Murphy, M Quan, J Knight, S Alexandersen

(2004), Vol. 85, pp. 415-421, Journal of general virology, London, Eng., C1-1

journal article
2003

Clinical and laboratory investigations of five outbreaks of foot-and-mouth disease during the 2001 epidemic in the United Kingdom

S Alexandersen, R Kitching, L Mansley, A Donaldson

(2003), Vol. 152, pp. 489-496, Veterinary record, London, Eng., C1-1

journal article

Airborne transmission of foot-and-mouth disease virus from Burnside Farm, Heddon-on-the-Wall, Northumberland, during the 2001 epidemic in the United Kingdom

J Gloster, H Champion, J Sørensen, T Mikkelsen, D Ryall, P Astrup, S Alexandersen, A Donaldson

(2003), Vol. 152, pp. 525-533, Veterinary record, London, Eng., C1-1

journal article

Investigation of airborne foot-and-mouth disease virus transmission during low-wind conditions in the early phase of the UK 2001 epidemic

T Mikkelsen, S Alexandersen, P Astrup, H Champion, A Donaldson, F Dunkerley, J Gloster, J Sørensen, S Thykier-Nielsen

(2003), Vol. 3, pp. 2101-2110, Atmospheric chemistry and physics, Göttingen, Germany, C1-1

journal article

The pathogenesis and diagnosis of foot-and-mouth disease

S Alexandersen, Z Zhang, A Donaldson, A Garland

(2003), Vol. 129, pp. 1-36, Journal of comparative pathology, London, Eng., C1-1

journal article

Studies of quantitative parameters of virus excretion and transmission in pigs and cattle experimentally infected with foot-and-mouth disease virus

S Alexandersen, M Quan, C Murphy, J Knight, Z Zhang

(2003), Vol. 129, pp. 268-282, Journal of comparative pathology, London, Eng., C1-1

journal article
2002

Clinical variation in foot and mouth disease: pigs

R Kitching, S Alexandersen

(2002), Vol. 21, pp. 513-518, Revue scientifique et technique de l'OIE, Paris, France, C1-1

journal article

Foot-and-mouth disease virus infection of sheep: implications for diagnosis and control

G Hughes, V Mioulet, R Kitching, M Woolhouse, S Alexandersen, A Donaldson

(2002), Vol. 150, pp. 724-727, Veterinary record, London, Eng., C1-1

journal article

Replication and clearance of respiratory syncytial virus: apoptosis is an important pathway of virus clearance after experimental infection with bovine respiratory syncytial virus

B Viuff, K Tjørnehøj, L Larsen, C Røntved, A Uttenthal, L Rønsholt, S Alexandersen

(2002), Vol. 161, pp. 2195-2207, American journal of pathology, Amsterdam, The Netherlands, C1-1

journal article

Aspects of the persistence of foot-and-mouth disease virus in animals-the carrier problem

S Alexandersen, Z Zhang, A Donaldson

(2002), Vol. 4, pp. 1099-1110, Microbes and infection, Amsterdam, The Netherlands, C1-1

journal article

Predicting the spread of foot and mouth disease by airborne virus

A Donaldson, S Alexandersen

(2002), Vol. 21, pp. 569-575, Revue Scientifique et Technique de l'OIE, Paris, France, C1-1

journal article

Natural aerosol transmission of foot-and-mouth disease virus to pigs: minimal infectious dose for strain O1 Lausanne

S Alexandersen, I Brotherhood, A Donaldson

(2002), Vol. 128, pp. 301-312, Epidemiology and infection, Cambridge, Eng., C1-1

journal article

Quantities of infectious virus and viral RNA recovered from sheep and cattle experimentally infected with foot-and-mouth disease virus O UK 2001

S Alexandersen, Z Zhang, S Reid, G Hutchings, A Donaldson

(2002), Vol. 83, pp. 1915-1923, Journal of general virology, London, Eng., C1-1

journal article

Evaluation of the portable Cepheid SmartCycler real-time PCR machine for the rapid diagnosis of foot-and-mouth disease

A Hearps, Z Zhang, S Alexandersen

(2002), Vol. 150, pp. 625-628, Veterinary record, London, Eng., C1-1

journal article

The effects of gamma interferon on replication of foot-and-mouth disease virus in persistently infected bovine cells

Z Zhang, G Hutching, P Kitching, S Alexandersen

(2002), Vol. 147, pp. 2157-2167, Archives of virology, Berlin, Germany, C1-1

journal article

Further studies to quantify the dose of natural aerosols of foot-and-mouth disease virus for pigs

S Alexandersen, A Donaldson

(2002), Vol. 128, pp. 313-323, Epidemiology and infection, Cambridge, Eng., C1-1

journal article

Experimental studies with foot-and-mouth disease virus, strain O, responsible for the 2001 epidemic in the United Kingdom

N Aggarwal, Z Zhang, S Cox, R Statham, S Alexandersen, R Kitching, P Barnett

(2002), Vol. 20, pp. 2508-2515, Vaccine, Amsterdam, The Netherlands, C1-1

journal article
2001

The early pathogenesis of foot-and-mouth disease in pigs infected by contact: a quantitative time-course study using TaqMan RT-PCR

S Alexandersen, M Oleksiewicz, A Donaldson

(2001), Vol. 82, pp. 747-755, Journal of general virology, London, Eng., C1-1

journal article
2000

Increased pulmonary secretion of tumor necrosis factor-∝ in calves experimentally infected with bovine respiratory syncytial virus

C Røntved, K Tjørnehøj, B Viuff, L Larsen, D Godson, L Rønsholt, S Alexandersen

(2000), Vol. 76, pp. 199-214, Veterinary immunology and immunopathology, Amsterdam, The Netherlands, C1-1

journal article

Development of reverse transcription-PCR (oligonucleotide probing) enzyme-linked immunosorbent assays for diagnosis and preliminary typing of foot-and-mouth disease: a new system using simple and aqueous-phase hybridization

S Alexandersen, M Forsyth, S Reid, G Belsham

(2000), Vol. 38, pp. 4604-4613, Journal of clinical microbiology, Washington, D.C., C1-1

journal article
1998

Vaccination with Aleutian mink disease parvovirus (AMDV) capsid proteins enhances disease, while vaccination with the major non-structural AMDV protein causes partial protection from disease

B Aasted, S Alexandersen, J Christensen

(1998), Vol. 16, pp. 1158-1165, Vaccine, Amsterdam, The Netherlands, C1-1

journal article

Serological and genetic characterisation of bovine respiratory syncytial virus (BRSV) indicates that Danish isolates belong to the intermediate subgroup: no evidence of a selective effect on the variability of G protein nucleotide sequence by prior cell culture adaption and passages in cell culture or calves

L Larsen, A Uttenthal, P Arctander, K Tjørnehøj, B Viuff, C Røntved, L Rønsholt, S Alexandersen, M Blixenkrone-Møller

(1998), Vol. 62, pp. 265-279, Veterinary microbiology, Amsterdam, The Netherlands, C1-1

journal article
1997

Two parvoviruses that cause different diseases in mink have different transcription patterns: transcription analysis of mink enteritis virus and Aleutian mink disease parvovirus in the same cell line

T Storgaard, M Oleksiewicz, M Bloom, B Ching, S Alexandersen

(1997), Vol. 71, pp. 4990-4996, Journal of virology, Washington D.C., C1-1

journal article
1996

Investigation of the pathogenesis of transplacental transmission of Aleutian mink disease parvovirus in experimentally infected mink

S Broll, S Alexandersen

(1996), Vol. 70, pp. 1455-1466, Journal of virology, Washington, D.C., C1-1

journal article

Subcellular localization of Aleutian mink disease parvovirus proteins and DNA during permissive infection of Crandell feline kidney cells

M Oleksiewicz, F Costello, M Huhtanen, J Wolfinbarger, S Alexandersen, M Bloom

(1996), Vol. 70, pp. 3242-3247, Journal of virology, Washington, D.C., C1-1

journal article
1995

The phosphoprotein gene of a dolphin morbillivirus isolate exhibits genomic variation at the editing site

G Bolt, S Alexandersen, M Blixenkrone-Møller

(1995), Vol. 76, pp. 3051-3058, Journal of general virology, London, Eng., C1-1

journal article

In situ hybridization for the detection of chicken anaemia virus in experimentally-induced infection and field outbreaks

O Nielsen, P Jørgensen, M Bisgaard, S Alexandersen

(1995), Vol. 24, pp. 149-155, Avian pathology, Abingdon, Eng., C1-1

journal article

Purification and characterization of the major nonstructural protein (NS-1) of Aleutian mink disease parvovirus

J Christensen, M Pedersen, B Aasted, S Alexandersen

(1995), Vol. 69, pp. 1802-1809, Journal of virology, Washington, D.C., C1-1

journal article
1994

Role of alveolar type II cells and of surfactant-associated protein C mRNA levels in the pathogenesis of respiratory distress in mink kits infected with Aleutian mink disease parvovirus

B Viuff, B Aasted, S Alexandersen

(1994), Vol. 68, pp. 2720-2725, Journal of Virology, Washington, D.C., C1-1

journal article

Acute interstitial pneumonia in mink kits inoculated with defined isolates of Aleutian mink disease parvovirus

S Alexandersen, S Larsen, B Aasted, A Uttenthal, M Bloom, M Hansen

(1994), Vol. 31, pp. 216-228, Veterinary Pathology, Thousand Oaks, Calif., C1-1

journal article

Sequence comparison of the non-structural genes of four different types of Aleutian mink disease parvovirus indicates an unusual degree of variability

E Gottschalck, S Alexandersen, T Storgaard, M Bloom, B Aasted

(1994), Vol. 138, pp. 213-231, Archives of Virology, Wien, Austria, C1-1

journal article

Production of mink enteritis parvovirus empty capsids by expression in a baculovirus vector system: a recombinant vaccine for mink enteritis parvovirus in mink

J Christensen, S Alexandersen, B Bloch, B Aasted, A Uttenthal

(1994), Vol. 75, pp. 149-155, Journal of General Virology, London, Eng., C1-1

journal article

Pathogenesis of Aleutian mink disease parvovirus infection: effects of suppression of antibody response on viral mRNA levels and on development of acute disease

S Alexandersen, T Storgaard, N Kamstrup, B Aasted, D Porter

(1994), Vol. 68, pp. 738-749, Journal of Virology, Washington, D.C., C1-1

journal article
1993

Comparison of promoter activity in Aleutian mink disease parvovirus, minute virus of mice, and canine parvovirus: possible role of weak promoters in the pathogenesis of Aleutian mink disease parvovirus infection

J Christensen, T Storgaard, B Viuff, B Aasted, S Alexandersen

(1993), Vol. 67, pp. 1877-1886, Journal of virology, Washington, D.C., C1-1

journal article

cis-acting sequences in the Aleutian mink disease parvovirus late promoter important for transcription: comparison to the canine parvovirus and minute virus of mice

T Storgaard, J Christensen, B Aasted, S Alexandersen

(1993), Vol. 67, pp. 1887-1895, Journal of virology, Washington D.C., C1-1

journal article

Expression of Aleutian mink disease parvovirus proteins in a baculovirus vector system

J Christensen, T Storgaard, B Bloch, S Alexandersen, B Aasted

(1993), Vol. 67, pp. 229-238, Journal of virology, Washington, D.C., C1-1

journal article

Identification of alternatively spliced mRNAs encoding potential new regulatory proteins in cattle infected with bovine leukemia virus

S Alexandersen, S Carpenter, J Christensen, T Storgaard, B Viuff, Y Wannemuehler, J Belousov, J Roth

(1993), Vol. 67, pp. 39-52, Journal of virology, Washington, D.C., C1-1

journal article
1987

INSITU MOLECULAR HYBRIDIZATION FOR DETECTION OF ALEUTIAN MINK DISEASE PARVOVIRUS DNA BY USING STRAND-SPECIFIC PROBES - IDENTIFICATION OF TARGET-CELLS FOR VIRAL REPLICATION IN CELL-CULTURES AND IN MINK KITS WITH VIRUS-INDUCED INTERSTITIAL PNEUMONIA

S ALEXANDERSEN, M BLOOM, J WOLFINBARGER, R RACE

(1987), Vol. 61, pp. 2407-2419, JOURNAL OF VIROLOGY, Washington, D.C., C1-1

journal article

Funded Projects at Deakin

Australian Competitive Grants

Genomic diversity, tolerance and ecology of wildlife disease

Prof Andy Bennett, Prof Soren Alexandersen, Prof Scott Edwards

ARC - Discovery Projects

  • 2020: $90,584
  • 2019: $99,730
  • 2018: $133,929

Human parechovirus type 3 outbreak 2017 laboratory study - Subproject - NHMRC CRE APPRISE APP1116530

Prof Soren Alexandersen

NHMRC - Centres of Research Excellence

  • 2018: $15,850

Developing sensitive methods for detection and quantification of genomic and subgenomic RNA targets and markers of inflammation - Subproject - NHMRC CRE APPRISE APP1116530

Prof Soren Alexandersen

NHMRC - Centres of Research Excellence

  • 2021: $50,000

Other Public Sector Funding

Ecology and Transmission of Mycobacterium ulcerans

Prof Soren Alexandersen, Dr Melanie Thomson, Dr Daniel O'Brien, Dr Wojtek Michalski, Prof Eugene Athan, Mr Michael Selorm Avumegah

CSIRO Scholarship - Commonwealth Scientific and Industrial Research Organisation

  • 2018: $4,151
  • 2017: $4,151
  • 2016: $8,302

One Health Training Centre

Prof Soren Alexandersen

CSIRO Grant - Research - Commonwealth Scientific and Industrial Research Organisation

  • 2017: $20,000
  • 2016: $150,000

Long term physical and psychological consequences of Covid-19 infection. A Comparitive Observational Study in Regional Victoria.

Prof Eugene Athan, Dr Darcie Cooper, Prof Peter Vuillermin, Dr Daniel O'Brien, Prof John Stambas, Prof Alister Ward, Prof Michael Berk, Prof Julie Pasco, A/Prof Alyssa Barry, Prof Soren Alexandersen

Department of Jobs, Precincts & Regions

  • 2021: $228,000

Industry and Other Funding

Viral metagenomics of Australian wild birds

Prof Soren Alexandersen, Mrs Jessy Vibin

Birds Australia Grant - Research

  • 2017: $4,940

Other Funding Sources

Viral metagenomics of Australian wild birds

Mrs Jessy Vibin, Prof Soren Alexandersen, Dr Anthony Chamings

BirdLife Travel (CAT8)

  • 2018: $1,000

Supervisions

Principal Supervisor
2021

Jessy Vibin

Thesis entitled: Metagenomics of viruses in Australian wild birds

Doctor of Philosophy (Medicine), School of Medicine

2018

Michael Selorm Avumegah

Thesis entitled: Epidemiology of Buruli Ulcer Cases and a Potential Screening Test for Exposure.

Doctor of Philosophy (Medicine), School of Medicine

Associate Supervisor
2024

Ariful Islam

Thesis entitled: Evolutionary Ecology and Epidemiology of High Pathogenicity Avian Influenza in Bangladesh

Doctor of Philosophy (Life & Env), School of Life and Environmental Sciences

2020

Darcie Cooper

Thesis entitled: Bacterial Attachment and Biofilms in Prosthetic Joint Infections

Doctor of Philosophy (Medicine), School of Medicine