Dr Larry Croft

STAFF PROFILE

Position

Associate Professor, Genomics & Manager, Deakin Genomics Research and Discovery Facility

Faculty

Faculty of Sci Eng & Built Env

Department

School of Life & Env. Sciences

Campus

Geelong Waurn Ponds Campus

Contact

l.croft@deakin.edu.au
+61 3 522 78633

Publications

Filter by

2019

Chromosome-level alpaca reference genome VicPac3.1 improves genomic insight into the biology of new world camelids

M Richardson, K Munyard, L Croft, T Allnutt, F Jackling, F Alshanbari, M Jevit, G Wright, R Cransberg, A Tibary, P Perelman, B Appleton, T Raudsepp

(2019), Vol. 10, pp. 1-15, Frontiers in genetics, Lausanne, Switzerland, C1

journal

Insights into microbial community structure and diversity in oil palm waste compost

N Khalid, H Rajandas, S Parimannan, L Croft, S Loke, C Chong, N Bruce, A Yahya

(2019), Vol. 9, pp. 1-11, 3 Biotech, Cham, Switzerland, C1

journal
2018

Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly

M Tan, C Austin, M Hammer, Y Lee, L Croft, H Gan

(2018), Vol. 7, pp. 1-6, Gigascience, Oxford, Eng., C1

journal
2017

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read

C Austin, M Tan, K Harrisson, Y Lee, L Croft, P Sunnucks, A Pavlova, H Gan

(2017), Vol. 6, pp. 1-6, Gigascience, Oxford, Eng., C1

journal
2016

First comprehensive multi-tissue transcriptome of Cherax quadricarinatus (Decapoda: Parastacidae) reveals unexpected diversity of endogenous cellulase

M Tan, H Gan, H Gan, Y Lee, L Croft, M Schultz, A Miller, C Austin

(2016), Vol. 16, pp. 185-200, Organisms diversity and evolution, Berlin, Germany, C1-1

journal

The complete mitogenome of the bluespotted ribbontail ray Taeniura lymma (Forsskl, 1775) (Elasmobranchii: Myliobatiformes: Dasyatidae)

C Austin, M Tan, L Croft, M Meekan, H Gan, H Gan

(2016), Vol. 27, pp. 3205-3207, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the cow tail ray Pastinachus atrus (Macleay, 1883) (Elasmobranchii; Myliobatiformes; Dasyatidae)

C Austin, M Tan, Y Lee, L Croft, M Meekan, H Gan

(2016), Vol. 27, pp. 1372-1373, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the Murray Cod, Maccullochella peelii (Mitchell, 1838) (Teleostei: Percichthyidae)

C Austin, M Tan, Y Lee, L Croft, H Gan

(2016), Vol. 27, pp. 729-730, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the whale shark parasitic copepod Pandarus rhincodonicus norman, Newbound & Knott (Crustacea; Siphonostomatoida; Pandaridae) - a new gene order for the copepoda

C Austin, M Tan, Y Lee, L Croft, M Meekan, S Pierce, H Gan

(2016), Vol. 27, pp. 694-695, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal

The complete mitogenome of the freshwater crayfish Cherax cainii (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 126-127, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

The complete mitogenome of the crayfish Cherax glaber (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 220-221, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal

Gender-specific molecular and clinical features underlie malignant pleural mesotheliom

A De Rienzo, M Archer, B Yeap, N Dao, D Sciaranghella, A Sideris, Y Zheng, A Holman, Y Wang, P Dal Cin, J Fletcher, R Rubio, L Croft, J Quackenbush, P Sugarbaker, K Munir, J Battilana, C Gustafson, L Chirieac, S Ching, J Wong, L Tay, S Rudd, R Hercus, D Sugarbaker, W Richards, R Beuno

(2016), Vol. 76, pp. 319-328, Cancer research, Philadelphia, Pa., C1-1

journal
2015

Whole genome sequencing of the Asian Arowana (Scleropages formosus) provides insights into the evolution of ray-finned fishes

C Austin, M Tan, L Croft, M Hammer, H Gan

(2015), Vol. 7, pp. 2885-2895, Genome biology and evolution, Oxford, Eng., C1-1

journal

Efficient extraction of small and large RNAs in bacteria for excellent total RNA sequencing and comprehensive transcriptome analysis.

R Heera, P Sivachandran, S Chinni, J Mason, L Croft, M Ravichandran, L Yin

(2015), Vol. 8, pp. 1-11, BMC research notes, London, Eng., C1-1

journal
2014

Helicobacter pylori genetic diversity and gastro-duodenal diseases in Malaysia

S Gunaletchumy, I Seevasant, M Tan, L Croft, H Mitchell, K Goh, M Loke, J Vadivelu

(2014), Vol. 4, pp. 1-9, Scientific Reports, London, Eng., C1-1

journal
2012

Extragenic suppressor mutations that restore twitching motility to fimL mutants of Pseudomonas aeruginosa are associated with elevated intracellular cyclic AMP levels

L Nolan, S Beatson, L Croft, P Jones, A George, J Mattick, L Turnbull, C Whitchurch

(2012), Vol. 1, pp. 490-501, Microbiologyopen, Chichester, Eng., C1-1

journal

Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs

C Voellenkle, J Rooij, A Guffanti, E Brini, P Fasanaro, E Isaia, L Croft, M David, M Capogrossi, A Moles, A Felsani, F Martelli

(2012), Vol. 18, pp. 472-484, RNA, New York, N.Y., C1-1

journal

Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs

L Croft, D Szklarczyk, L Jensen, J Gorodkin

(2012), Vol. 6, pp. 1-10, BMC systems biology, London, Eng., C1-1

journal
2011

Intron splicing suppresses RNA silencing in Arabidopsis

M Christie, L Croft, B Carroll

(2011), Vol. 68, pp. 159-167, Plant journal, Chichester, Eng., C1-1

journal

Evaluation of polymorphisms in predicted target sites for micro RNAs differentially expressed in endometriosis

Z Zhao, L Croft, D Nyholt, B Chapman, S Treloar, M Hull, G Montgomery

(2011), Vol. 17, pp. 92-103, Molecular human reproduction, Oxford, Eng., C1-1

journal

MicroRNAs in the shoot apical meristem of soybean

C Wong, Y-T Zhao, X-J Wang, L Croft, Z-H Wang, F Haerizadeh, J Mattick, M Singh, B Carroll, P Bhalla

(2011), Vol. 62, pp. 2495-2506, Journal of experimental botany, Oxford, Eng., C1-1

journal
2009

A transcriptional sketch of a primary human breast cancer by 454 deep sequencing

A Guffanti, M Iacono, P Pelucchi, N Kim, G Sold, L Croft, R Taft, E Rizzi, M Askarian-Amiri, R Bonnal, M Callari, F Mignone, G Pesole, G Bertalot, L Bernardi, A Albertini, C Lee, J Mattick, I Zucchi, G De Bellis

(2009), Vol. 10, pp. 1-17, BMC genomics, London, Eng., C1-1

journal
2003

Aboriginality under the microscope: the biological descent test in Australian law

Loretta De Plevitz, Larry Croft

(2003), Vol. 3, QUT law review, Brisbane, Qld., C1-1

journal
2000

An interactive web-based Pseudomonas aeruginosa genome database: discovery of new genes, pathways and structures

L Croft, S Beatson, C Whitchurch, B Huang, R Blakeley, J Mattick

(2000), Vol. 146, pp. 2351-2364, Microbiology, London, Eng., C1-1

journal

A minimal tiling path cosmid library for functional analysis of the Pseudomonas aeruginosa PAO1 genome

B Huang, C Whitchurch, L Croft, S Beatson, J Mattick

(2000), Vol. 5, pp. 189-203, Microbial & comparative genomics, New Rochelle, N.Y., C1-1

journal

Funded Projects at Deakin

Other Public Sector Funding

Population genomic assessment of Australian backlip abalone for abalone viral ganglioneuritis (AVG) resistance.

Dr Adam Miller, Dr Craig Sherman, Dr Larry Croft

  • 2019: $47,000

Supervisions

No completed student supervisions to report