A/Prof. Larry Croft

STAFF PROFILE

Position

Associate Professor, Genomics & Manager, Deakin Genomics Research and Discovery Facility

Faculty

Faculty of Sci Eng & Built Env

Department

School of Life & Env. Sciences

Campus

Geelong Waurn Ponds Campus

Contact

l.croft@deakin.edu.au
+61 3 522 78633

Publications

Filter by

2021

First Genome of Labyrinthula sp., an opportunistic seagrass pathogen, reveals novel insight into marine protist phylogeny, Ecology and CAZyme cell-wall degradation

Mun Tan, Stella Loke, Laurence Croft, Frank Gleason, Lene Lange, Bo Pilgaard, Stacey Trevathan-Tackett

(2021), Microbial Ecology, Springer New York, N.Y., C1

journal article

Description and detection of excludons as transcriptional regulators in gram-positive, gram-negative and archaeal strains of prokaryotes

J Chia, K Khoo, T Ling, L Croft, S Manickam, Y Yap, P Show

(2021), Vol. 32, pp. 1-6, Biocatalysis and Agricultural Biotechnology, Amsterdam, The Netherlands, C1

journal article

Discovery Genome-Wide Association Study of Body Composition in 4,386 Adults From the UK Biobank's Pilot Imaging Enhancement Study

Katherine Livingstone, Mun Tan, Gavin Abbott, Rachel Duckham, Larry Croft, Joey Ward, Mark McEvoy, Michelle Keske, Christopher Austin, Steven Bowe

(2021), Vol. 12, FRONTIERS IN ENDOCRINOLOGY, C1

journal article

The impact of infectious diseases consultation on the management and outcomes of Pseudomonas aeruginosa bacteraemia in adults: a retrospective cohort study

F Chiong, M Wasef, K Liew, R Cowan, D Tsai, Y Lee, L Croft, O Harris, S Gwini, E Athan

(2021), Vol. 21, BMC Infectious Diseases, C1

journal article
2020

A giant genome for a giant crayfish (Cherax quadricarinatus) with insights into cox1 pseudogenes in decapod genomes

Mun Tan, Han Gan, Yin Lee, Frederic Grandjean, Laurence Croft, Christopher Austin

(2020), Vol. 11, pp. 1-10, Frontiers in genetics, Lausanne, Switzerland, C1

journal article

Dataset for genome sequencing and de novo assembly of the Vietnamese bighead catfish (Clarias macrocephalus Günther, 1864)

T Duong, M Tan, Y Lee, L Croft, C Austin

(2020), Vol. 31, pp. 1-8, Data in brief, Amsterdam, The Netherlands, C1

journal article

Chitinophaga extrema sp. nov., isolated from subsurface soil and leaf litter in a tropical peat swamp forest

Calvin Goh, Li Wong, Sivachandran Parimannan, Heera Rajandas, Stella Loke, Lawrence Croft, Catherine Yule, Pooria Pasbakhsh, Sui Lee, Joash Tan

(2020), Vol. 70, pp. 6355-6363, International journal of systematic and evolutionary microbiology, London, Eng., C1

journal article

New insights on the evolution of the sweet taste receptor of primates adapted to harsh environments

N Tamrin, R Zainudin, Y Esa, H Alias, M Isa, L Croft, M Abdullah

(2020), Vol. 10, pp. 1-16, Animals, Basel, Switzerland, C1

journal article
2019

Chromosome-level alpaca reference genome VicPac3.1 improves genomic insight into the biology of new world camelids

M Richardson, K Munyard, L Croft, T Allnutt, F Jackling, F Alshanbari, M Jevit, G Wright, R Cransberg, A Tibary, P Perelman, B Appleton, T Raudsepp

(2019), Vol. 10, pp. 1-15, Frontiers in genetics, Lausanne, Switzerland, C1

journal article

Insights into microbial community structure and diversity in oil palm waste compost

N Khalid, H Rajandas, S Parimannan, L Croft, S Loke, C Chong, N Bruce, A Yahya

(2019), Vol. 9, pp. 1-11, 3 Biotech, Cham, Switzerland, C1

journal article

Complete genome sequence of Sphingomonas paucimobilis AIMST S2, a xenobiotic-degrading bacterium

Suganniiya Ravintheran, Sumitra Sivaprakasam, Stella Loke, Su Lee, Ravichandran Manickam, Adibah Yahya, Lawrence Croft, Andrew Millard, Sivachandran Parimannan, Heera Rajandas

(2019), Vol. 6, pp. 1-6, Scientific data, C1

journal article

Whole genome assembly of the snout otter clam, Lutraria rhynchaena, using nanopore and illumina data, benchmarked against bivalve genome assemblies

Thanh Binh, Y Lee, Han Gan, Christopher Austin, Laurence Croft, Anh Tuan, M Tan

(2019), Vol. 10, pp. 1-8, Frontiers in genetics, Lausanne, Switzerland, C1

journal article
2018

Finding Nemo: hybrid assembly with Oxford Nanopore and Illumina reads greatly improves the clownfish (Amphiprion ocellaris) genome assembly

M Tan, C Austin, M Hammer, Y Lee, L Croft, H Gan

(2018), Vol. 7, pp. 1-6, Gigascience, Oxford, Eng., C1

journal article
2017

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore sequencing read

C Austin, M Tan, K Harrisson, Y Lee, L Croft, P Sunnucks, A Pavlova, H Gan

(2017), Vol. 6, pp. 1-6, Gigascience, Oxford, Eng., C1

journal article
2016

First comprehensive multi-tissue transcriptome of Cherax quadricarinatus (Decapoda: Parastacidae) reveals unexpected diversity of endogenous cellulase

M Tan, H Gan, H Gan, Y Lee, L Croft, M Schultz, A Miller, C Austin

(2016), Vol. 16, pp. 185-200, Organisms diversity and evolution, Berlin, Germany, C1-1

journal article

The complete mitogenome of the bluespotted ribbontail ray Taeniura lymma (Forsskål, 1775) (Elasmobranchii: Myliobatiformes: Dasyatidae)

C Austin, M Tan, L Croft, M Meekan, H Gan, H Gan

(2016), Vol. 27, pp. 3205-3207, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal article

The complete mitogenome of the cow tail ray Pastinachus atrus (Macleay, 1883) (Elasmobranchii; Myliobatiformes; Dasyatidae)

C Austin, M Tan, Y Lee, L Croft, M Meekan, H Gan

(2016), Vol. 27, pp. 1372-1373, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal article

The complete mitogenome of the Murray Cod, Maccullochella peelii (Mitchell, 1838) (Teleostei: Percichthyidae)

C Austin, M Tan, Y Lee, L Croft, H Gan

(2016), Vol. 27, pp. 729-730, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal article

The complete mitogenome of the whale shark parasitic copepod Pandarus rhincodonicus norman, Newbound & Knott (Crustacea; Siphonostomatoida; Pandaridae) - a new gene order for the copepoda

C Austin, M Tan, Y Lee, L Croft, M Meekan, S Pierce, H Gan

(2016), Vol. 27, pp. 694-695, Mitochondrial DNA part a, Abingdon, Eng., C1-1

journal article

The complete mitogenome of the freshwater crayfish Cherax cainii (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 126-127, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal article

The complete mitogenome of the crayfish Cherax glaber (Crustacea: Decapoda: Parastacidae)

C Austin, M Tan, L Croft, H Gan

(2016), Vol. 27, pp. 220-221, Mitochondrial DNA Part A, Abingdon, Eng., C1-1

journal article

Gender-specific molecular and clinical features underlie malignant pleural mesotheliom

A De Rienzo, M Archer, B Yeap, N Dao, D Sciaranghella, A Sideris, Y Zheng, A Holman, Y Wang, P Dal Cin, J Fletcher, R Rubio, L Croft, J Quackenbush, P Sugarbaker, K Munir, J Battilana, C Gustafson, L Chirieac, S Ching, J Wong, L Tay, S Rudd, R Hercus, D Sugarbaker, W Richards, R Beuno

(2016), Vol. 76, pp. 319-328, Cancer research, Philadelphia, Pa., C1-1

journal article
2015

Whole genome sequencing of the Asian Arowana (Scleropages formosus) provides insights into the evolution of ray-finned fishes

C Austin, M Tan, L Croft, M Hammer, H Gan

(2015), Vol. 7, pp. 2885-2895, Genome biology and evolution, Oxford, Eng., C1-1

journal article

Efficient extraction of small and large RNAs in bacteria for excellent total RNA sequencing and comprehensive transcriptome analysis.

R Heera, P Sivachandran, S Chinni, J Mason, L Croft, M Ravichandran, L Yin

(2015), Vol. 8, pp. 1-11, BMC research notes, London, Eng., C1-1

journal article
2014

Helicobacter pylori genetic diversity and gastro-duodenal diseases in Malaysia

S Gunaletchumy, I Seevasant, M Tan, L Croft, H Mitchell, K Goh, M Loke, J Vadivelu

(2014), Vol. 4, pp. 1-9, Scientific Reports, London, Eng., C1-1

journal article
2012

Extragenic suppressor mutations that restore twitching motility to fimL mutants of Pseudomonas aeruginosa are associated with elevated intracellular cyclic AMP levels

L Nolan, S Beatson, L Croft, P Jones, A George, J Mattick, L Turnbull, C Whitchurch

(2012), Vol. 1, pp. 490-501, Microbiologyopen, Chichester, Eng., C1-1

journal article

Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs

C Voellenkle, J Rooij, A Guffanti, E Brini, P Fasanaro, E Isaia, L Croft, M David, M Capogrossi, A Moles, A Felsani, F Martelli

(2012), Vol. 18, pp. 472-484, RNA, New York, N.Y., C1-1

journal article

Multiple independent analyses reveal only transcription factors as an enriched functional class associated with microRNAs

L Croft, D Szklarczyk, L Jensen, J Gorodkin

(2012), Vol. 6, pp. 1-10, BMC systems biology, London, Eng., C1-1

journal article
2011

Intron splicing suppresses RNA silencing in Arabidopsis

M Christie, L Croft, B Carroll

(2011), Vol. 68, pp. 159-167, Plant journal, Chichester, Eng., C1-1

journal article

Evaluation of polymorphisms in predicted target sites for micro RNAs differentially expressed in endometriosis

Z Zhao, L Croft, D Nyholt, B Chapman, S Treloar, M Hull, G Montgomery

(2011), Vol. 17, pp. 92-103, Molecular human reproduction, Oxford, Eng., C1-1

journal article

MicroRNAs in the shoot apical meristem of soybean

C Wong, Y-T Zhao, X-J Wang, L Croft, Z-H Wang, F Haerizadeh, J Mattick, M Singh, B Carroll, P Bhalla

(2011), Vol. 62, pp. 2495-2506, Journal of experimental botany, Oxford, Eng., C1-1

journal article
2009

A transcriptional sketch of a primary human breast cancer by 454 deep sequencing

A Guffanti, M Iacono, P Pelucchi, N Kim, G Soldà, L Croft, R Taft, E Rizzi, M Askarian-Amiri, R Bonnal, M Callari, F Mignone, G Pesole, G Bertalot, L Bernardi, A Albertini, C Lee, J Mattick, I Zucchi, G De Bellis

(2009), Vol. 10, pp. 1-17, BMC genomics, London, Eng., C1-1

journal article
2003

Aboriginality under the microscope: the biological descent test in Australian law

Loretta De Plevitz, Larry Croft

(2003), Vol. 3, QUT law review, Brisbane, Qld., C1-1

journal article
2000

An interactive web-based Pseudomonas aeruginosa genome database: discovery of new genes, pathways and structures

L Croft, S Beatson, C Whitchurch, B Huang, R Blakeley, J Mattick

(2000), Vol. 146, pp. 2351-2364, Microbiology, London, Eng., C1-1

journal article

A minimal tiling path cosmid library for functional analysis of the Pseudomonas aeruginosa PAO1 genome

B Huang, C Whitchurch, L Croft, S Beatson, J Mattick

(2000), Vol. 5, pp. 189-203, Microbial & comparative genomics, New Rochelle, N.Y., C1-1

journal article

Funded Projects at Deakin

Australian Competitive Grants

Population genomic assessment of Australian backlip abalone for abalone viral ganglioneuritis (AVG) resistance.

Dr Adam Miller, A/Prof Craig Sherman, A/Prof Larry Croft

FRDC Grant - Research - Fisheries Research & Development Corporation

  • 2021: $23,931
  • 2020: $44,769
  • 2019: $97,000

Supervisions

No completed student supervisions to report